Student Publications

Chion, M.; Costanzo, M.; Gebelin, M.; van Gelder, C. A. G. H.; Grunauer, S. V.; Lechner, M.; Leytens, A.; Nasery, M. M.; Ingola, M.; Peinado-Izaguerri, J. et al.; Provasi, C.; Puchalski, M.; Schebesta, A.-S.; Schmidt, L. M.; Sugar, S.: Proteomics at scale: Bottlenecks and opportunities for early-career researchers in a fast developing field. Journal of Proteomics 331, 105679 (2026)

Zhuang, Z.; Byun, W. S.; Chrustowicz, J.; Kozicka, Z.; Li, V. L.; Abeja, D. M.; Donovan, K. A.; Sepic, S.; You, I.; Słabicki, M. et al.; Fischer, E. S.; Hinshaw, S. M.; Ebert, B. L.; Schulman, B. A.; Gray, N. S.: Charged Molecular Glue Discovery Enabled by Targeted Degron Display. Nature Chemical Biology 22, pp. 1446 - 1455 (2026)

Nguyen, T. A.; Xu, Z.; Schwille, P.: Mimicking Cellular Membranes With Micropatterned Lipid Bilayers. ChemPhysChem 27 (16), e70534 (2026)

Razavi, R.; Fathi, A.; Yellan, I.; Brechalov, A.; Laverty, K. U.; Jolma, A.; Hernandez-Corchado, A.; Zheng, H.; Yang, A. W. H.; Albu, M. et al.; Barazandeh, M.; Hu, C.; Vorontsov, I. E.; Patel, Z. M.; Deplancke, B.; Fornes, O.; Grau, J.; Grosse, I.; Kolpakov, F. A.; Makeev, V. J.; Deng, Z.; Lambert, S. A.; Pour, S. E.; Salnikov, M.; Meshcheryakov, G.; Ambrosini, G.; Gralak, A. J.; Inukai, S.; Kribelbauer-Swietek, J. F.; Plescher, M.-L.; Kolmykov, S.; Yevshin, I.; Gryzunov, N.; Kozin, I.; Nikonov, M.; Nozdrin, V.; Zinkevich, A.; Faltejskova, K.; Kravchenko, P.; Abramov, S.; Boytsov, A.; Kamenets, V.; Penzar, D.; Vlasov, A.; Chen, X.; Weirauch, M.; Kulakovskiy, I. V.; Bucher, P.; Morris, Q.; Najafabadi, H. S.; Hughes, T. R.: Extensive binding of poorly characterized human transcription factors to genomic dark matter. Nature Communications 17 (1), 7770 (2026)

Halbeisen, M.; Gavrilović, S.; Qutbuddin, Y.; Heredero, J.; Schwille, P.: Modular PEG coatings for engineering a biomimetic glycocalyx on lipid membranes. Soft Matter 22 (32), pp. 5357 - 5367 (2026)

Abbas, D. K.; Bonneau, F.; Wilkinson, M. E.; Schüssler, S.; Basquin, J.; Conti, E.: Evolutionarily conserved spliceosome–exosome pathway in nuclear mRNA surveillance. Genes & Development 40 (13-14), pp. 1119 - 1132 (2026)

Reinhardt, S. C. M.; Böttcher, R. T.; Brod, F.; Speidel, J. D.; Jungmann, R.; Fässler, R.: ILK binding to β1 integrin is indirect and mediated by kindlin-2. Proceedings of the National Academy of Sciences of the United States of America 123 (27), e2537126123 (2026)

Barnes, C.; Treit, P.; Earp, B.; Savulescu, J.; Porsdam Mann, S.: A Beginner's Guide to Decentralized Biobanking. Biopreservation and Biobanking 24 (3), pp. 247 - 256 (2026)

Guyot, C.; van de Velde, L.-A.; Kainacher, L.; Ruoff, J.; Bici, A.; Peterson, N. B.; Ogger, P. P.; Allen, E. K.; Steigenberger, B.; Yeroslaviz, A. et al.; Yang, J.; Zeitler, L.; Thomas, P. G.; Murray, P. J.: IL4i1 activity generates oncometabolites that rescue neuroblastoma cells from oxidative death. Cell Reports 45 (6), 117441 (2026)

Sinha, A.; Sachs, N.; Kratz, E.; Pauli, J.; Steigerwald, S.; Albrecht, V.; Nordmann, T. M.; Ugur, E.; Rodriguez, E. H.; Engl, M.-L. et al.; Skowronek, P.; Oliinyk, D.; Metousis, A.; von Scheidt, M.; Wierer, M.; Winter, H.; Schunkert, H.; Branzan, D.; Maegdefessel, L.; Mann, M.: Proteomics reveals spatial and molecular heterogeneities in advanced atherosclerotic carotid artery plaques. Nature Cardiovascular Research 5, pp. 605 - 623 (2026)

Venafra, V.; Wahle, M.; Massacci, G.; Bica, V.; Chiusolo, P.; Mougiakakos, D.; Boettcher, M.; Fischer, T.; Perfetto, L.; Mann, M. et al.; Sacco, F.: Kinase inhibition rewires the HLA-I immunopeptidome in chronic myeloid leukemia. iScience 29 (6), 115944 (2026)

Bewersdorf, L.; Haber, S.; Volkert, I.; Remih, K.; Gross, A.; Preisinger, C.; Kroll, L.; Cramer, T.; Gaisa, N. T.; Leypold, S. et al.; Rolle-Kampczyk, U.; Brunetti-Pierri, N.; von Bergen, M.; Rosenberger, F.; Weiss, C. A. M.; Guldiken, N.; Strnad, P.: Loss of the Mechanistic Target of Rapamycin Complex 1 Causes a Lethal Alpha-1 Antitrypsin Deficiency-Associated Liver Disease. Cellular and Molecular Gastroenterology and Hepatology 20 (10), 101824 (2026)

Gavrilovic, S.; Halbeisen, M.; Nguyen, T. A.; Qutbuddin, Y.; Schwille, P.: Light-Gated Assembly of Membrane-Bound DNA Filaments as Synthetic Cell Modules. Small structures 7 (6), e70502 (2026)

Andree, G. A.; Stier, L.; Schmiederer, K.; Thielen, A.; Schmid, L.; Maiwald, S. A.; Gottemukkala, K. V.; Du, J.; von Gronau, S.; Strasser, C. et al.; Mueller, J.; Henneberg, L. T.; Guyot, C.; Kleiger, G.; Mann, M.; Murray, P.; Schulman, B. A.: Cysteine availability tunes ubiquitin signaling via inverse stability of LRRC58 E3 ligase and its substrate CDO1. Nature Communications 17, 4196 (2026)

Mortazavi, A.; Jiang, J.; Laric, P.; Helmerich, D. A.; Seifert, R.; Gavrilovic, S.; Sauer, M.; Sabass, B.: Traction Force Microscopy with DNA FluoroCubes. Langmuir 42 (16), pp. 10857 - 10872 (2026)

Krimmel, M.; Hartout, P.; Borgwardt, K.; Chen, D.: PolyGraph Discrepancy: A Classifier-Based Metric for Graph Generation. arXiv (2026)

Larrea-Sebal, A.; Dai, C.; Brenes, A. J.; Korff, K.; Neely, B. A.; Geyer, P. E.; Dagley, L. F.; Unwin, R. D.; Naba, A.; MacCoss, M. J. et al.; Guo, T.; Deutsch, E. W.; Martin, C.; Schwenk, J. M.; Perez-Riverol, Y.: Blood proteomics: Insights from public data. Genome Biology 27, 81 (2026)

Weiss, C. A. M.; Brown, L. A.; Miranda, L.; Pellizzoni, P.; Steigerwald, S.; Remmert, K.; Hernandez, J. M.; Borgwardt, K.; Kleiner, D. E.; Ben-Moshe, S. et al.; Rosenberger, F. A.; Porat-Shliom, N.; Mann, M.: Single-cell spatial proteomics maps human liver zonation patterns and their vulnerability to disruption in tissue architecture. Nature Metabolism 8, pp. 741 - 756 (2026)

Kurscheidt, K.; Theunissen, S.; Pasquali, N.; Becker, K.; Boehm, V.; Conti, E.; Gehring, N. H.: Composite SMG5-SMG6 PIN domain formation is essential for NMD. Nature Communications 17, 1934 (2026)

Kaech, B.; Wyss, L.; Borgwardt, K.; Grassow, G.: Refine Drugs, Don’t Complete Them: Uniform-Source Discrete Flows for Fragment-Based Drug Discovery. 14th International Conference on Learning Representations (ICLR 2026) (2026)