Publications of Matthias Mann

Chen, Y. Y.; Evavold, C. L.; Mann, M.; Davenport, E. R.; McFall-Ngai, M.; Bienko, M.; Ueda, H. R.; Tjahjono, N.; Tian, L.; Anikeeva, P. et al.; Liu, J.-J. G.; Deans, T. L.; Shen, X.: What tool or method do you wish existed? Cell 187 (17), pp. 4433 - 4438 (2024)

Rasmussen, M. K.; Mollgard, K.; Bork, P. A. R.; Weikop, P.; Esmail, T.; Drici, L.; Albrechtsen, N. J. W.; Carlsen, J. F.; Huynh, N. P. T.; Ghitani, N. et al.; Mann, M.; Goldman, S. A.; Mori, Y.; Chesler, A. T.; Nedergaard, M.: Trigeminal ganglion neurons are directly activated by influx of CSF solutes in a migraine model. Science 385 (6704), pp. 80 - 86 (2024)

Doll, S.; Schweizer, L.; Bollwein, C.; Steiger, K.; Pfarr, N.; Walker, M.; Woertler, K.; Knebel, C.; von Eisenhart-Rothe, R.; Hartmann, W. et al.; Weichert, W.; Mann, M.; Kuhn, P. -.; Specht, K.: Proteomic Characterization of Undifferentiated Small Round Cell Sarcomas With EWSR1 and CIC::DUX4 Translocations Reveals Diverging Tumor Biology and Distinct Diagnostic Markers. Modern Pathology 37 (7), 100511 (2024)

Horn-Ghetko, D.; Hopf, L. V. M.; Tripathi-Giesgen, I.; Du, J.; Kostrhon, S.; Tung Vu, D.; Beier, V.; Steigenberger, B.; Prabu, J. R.; Stier, L. et al.; Bruss, E. M.; Mann, M.; Xiong, Y.; Schulman, B. A.: Noncanonical assembly, neddylation and chimeric cullin-RING/RBR ubiquitylation by the 1.8 MDa CUL9 E3 ligase complex. Nature Structural & Molecular Biology 31 (7), pp. 1083 - 1094 (2024)

Naimy, S.; Solberg, J. B. K.; Kuczek, D. E.; Lovendorf, M. B.; Bzorek, M.; Litman, T.; Mund, A.; Gjerdrum, L. M. R.; Clark, R. A.; Mann, M. et al.; Dyring-Andersen, B.: Comparative Quantitative Proteomic Analysis of Melanoma Subtypes, Nevus-Associated Melanoma, and Corresponding Nevi. Journal of Investigative Dermatology 144 (7), pp. 1608 - 1621 (2024)

Webel, H.; Niu, L.; Nielsen, A. B.; Locard-Paulet, M.; Mann, M.; Jensen, L. J.; Rasmussen, S.: Imputation of label-free quantitative mass spectrometry-based proteomics data using self-supervised deep learning. Nature Communications 15 (1), 5405 (2024)

Murgia, M.; Rittweger, J.; Reggiani, C.; Bottinelli, R.; Mann, M.; Schiaffino, S.; Narici, M. V.: Spaceflight on the ISS changed the skeletal muscle proteome of two astronauts. Npj Microgravity 10 (1), 60 (2024)

Nygaard, U.; Nielsen, A. B.; Dungu, K. H. S.; Drici, L.; Holm, M.; Ottenheijm, M. E.; Nielsen, A. B.; Glenthoj, J. P.; Schmidt, L. S.; Cortes, D. et al.; Jorgensen, I. M.; Mogensen, T. H.; Schmiegelow, K.; Mann, M.; Vissing, N. H.; Albrechtsen, N. J. B.: Proteomic profiling reveals diagnostic signatures and pathogenic insights in multisystem inflammatory syndrome in children. Communications Biology 7 (1), 688 (2024)

Jiang, S.; Yuan, T.; Rosenberger, F. A.; Mourier, A.; Dragano, N. R. V.; Kremer, L. S.; Rubalcava-Gracia, D.; Hansen, F. M.; Borg, M.; Mennuni, M. et al.; Filograna, R.; Alsina, D.; Misic, J.; Koolmeister, C.; Papadea, P.; de Angelis, M. H.; Ren, L.; Andersson, O.; Unger, A.; Bergbrede, T.; Di Lucrezia, R.; Wibom, R.; Zierath, J. R.; Krook, A.; Giavalisco, P.; Mann, M.; Larsson, N.-G.: Inhibition of mammalian mtDNA transcription acts paradoxically to reverse diet-induced hepatosteatosis and obesity. Nature Metabolism 6 (6), pp. 1024 - 1035 (2024)

Gottemukkala, K. V.; Chrustowicz, J.; Sherpa, D.; Sepic, S.; Tung Vu, D.; Karayel, O.; Papadopoulou, E. C.; Gross, A.; Schorpp, K.; von Gronau, S. et al.; Hadian, K.; Murray, P. J.; Mann, M.; Schulman, B. A.; Alpi, A. F.: Non-canonical substrate recognition by the human WDR26-CTLH E3 ligase regulates prodrug metabolism. Molecular Cell 84 (10), pp. 1948 - 1963.e11 (2024)

Sommer, S.; Schmutz, M.; Hildebrand, K.; Schiwitza, A.; Benedikt, S.; Eberle, M.; Moegele, T.; Sultan, A.; Reichl, L.; Campillo, M. et al.; Uhrmacher, L.; Nikolic, A. A.; Bundschuh, R.; Lapa, C.; Kuhlen, M.; Dintner, S.; Langer, A.; Maerkl, B.; Wendler, T.; Tehlan, K.; Kroencke, T.; Wahle, M.; Mann, M.; Casadei, N.; Pogoda, M.; Hummler, S.; Sax, I.; Schlesner, M.; Kubuschok, B.; Trepel, M.; Claus, R.: Concept and feasibility of the Augsburg longitudinal plasma study (ALPS) - A prospective trial for comprehensive liquid biopsy-based longitudinal monitoring of solid cancer patients. Journal of Laboratory Medicine 48 (3), pp. 107 - 119 (2024)

Ducommun, S.; Jannig, P. R.; Cervenka, I.; Murgia, M.; Mittenbuhler, M. J.; Chernogubova, E.; Dias, J. M.; Jude, B.; Correia, J. C.; Van Vranken, J. G. et al.; Ocana-Santero, G.; Porsmyr-Palmertz, M.; Haworth, S. M.; Martinez-Redondo, V.; Liu, Z.; Carlstrom, M.; Mann, M.; Lanner, J. T.; Teixeira, A. I.; Maegdefessel, L.; Spiegelman, B. M.; Ruas, J. L.: Mustn1 is a smooth muscle cell-secreted microprotein that modulates skeletal muscle extracellular matrix composition. Molecular Metabolism 82, 101912 (2024)

Fumero, E. F.; Walter, C.; Frenz, J. M.; Seifert, F.; Alla, V.; Hennig, T.; Angenendt, L.; Hartmann, W.; Wolf, S.; Serve, H. et al.; Oellerich, T.; Lenz, G.; Mueller-Tidow, C.; Schliemann, C.; Huber, O.; Dugas, M.; Mann, M.; Jayavelu, A. K.; Mikesch, J.-H.; Arteaga, M. F.: Epigenetic control over the cell-intrinsic immune response antagonizes self-renewal in acute myeloid leukemia. Blood 143 (22), pp. 2284 - 2299 (2024)

Neukam, M.; Sala, P.; Brunner, A.-D.; Ganss, K.; Palladini, A.; Grzybek, M.; Topcheva, O.; Vasiljevic, J.; Broichhagen, J.; Johnsson, K. et al.; Kurth, T.; Mann, M.; Coskun, U.; Solimena, M.: Purification of time-resolved insulin granules reveals proteomic and lipidomic changes during granule aging. Cell Reports 43 (3), 113836 (2024)

Strauss, M. T.; Bludau, I.; Zeng, W.-F.; Voytik, E.; Ammar, C.; Schessner, J. P.; Ilango, R.; Gill, M.; Meier, F.; Willems, S. et al.; Mann, M.: AlphaPept: A modern and open framework for MS-based proteomics. Nature Communications 15 (1), 2168 (2024)

Steigerwald, S.; Sinha, A.; Fort, K. L.; Zeng, W.-F.; Niu, L.; Wichmann, C.; Kreutzmann, A.; Mourad, D.; Aizikov, K.; Grinfeld, D. et al.; Makarov, A.; Mann, M.; Meier, F.: Full Mass Range ΦSDM Orbitrap Mass Spectrometry for DIA Proteome Analysis. Molecular & Cellular Proteomics 23 (2), 100713 (2024)

Teunissen, M. B. M.; Moller, L. B. P.; Lovendorf, M. B.; Skov, L.; Bonefeld, C. M.; Bekkenk, M. W.; Clark, R. A.; Mann, M.; Dyring-Andersen, B.: In-Depth Proteomic Map of Innate Lymphoid Cells from Human Skin and Blood. The Journal of Investigative Dermatology 144 (2), pp. 316 - 330.e3 (2024)

Chrustowicz, J.; Sherpa, D.; Li, J.; Langlois, C. R.; Papadopoulou, E. C.; Tung Vu, D.; Hehl, L. A.; Karayel, Ö.; Beier, V.; Gronau, S. v. et al.; Müller, J.; Prabu, J. R.; Mann, M.; Kleiger, G.; Alpi, A. F.; Schulman, B. A.: Multisite phosphorylation dictates selective E2-E3 pairing as revealed by Ubc8/UBE2H-GID/CTLH assemblies. Molecular Cell 84 (2), pp. 293 - 308 (2024)

Kardell, O.; von Toerne, C.; Merl-Pham, J.; Koenig, A.-C.; Blindert, M.; Barth, T. K.; Mergner, J.; Ludwig, C.; Tueshaus, J.; Eckert, S. et al.; Mueller, S. A.; Breimann, S.; Giesbertz, P.; Bernhardt, A. M.; Schweizer, L.; Albrecht, V.; Teupser, D.; Imhof, A.; Kuster, B.; Lichtenthaler, S. F.; Mann, M.; Cox, J.; Hauck, S. M.: Multicenter Collaborative Study to Optimize Mass Spectrometry Workflows of Clinical Specimens. Journal of Proteome Research 23 (1), pp. 117 - 129 (2024)

Hansen, F. M.; Kremer, L. S.; Karayel, O.; Bludau, I.; Larsson, N.-G.; Kühl, I.; Mann, M.: Mitochondrial phosphoproteomes are functionally specialized across tissues. Life Science Alliance 7, e202302147 (2024)