Student Publications

Klumpe, S.; Senti, K. A.; Beck, F.; Sachweh, J.; Hampoelz, B.; Ronchi, P.; Oorschot, V.; Brandstetter, M.; Yeroslaviz, A.; Briggs, J. A. G. et al.; Brennecke, J.; Beck, M.; Plitzko, J. M.: In-cell structure and snapshots of copia retrotransposons in intact tissue by cryoelectron tomography. Cell 188 (8), pp. 2094 - 2110.e18 (2025)

Klumpe, S.; Senti, K. A.; Beck, F.; Sachweh, J.; Hampoelz, B.; Ronchi, P.; Oorschot, V.; Brandstetter, M.; Yeroslaviz, A.; Briggs, J. A. G. et al.; Brennecke, J.; Beck, M.; Plitzko, J. M.: In-cell structure and snapshots of copia retrotransposons in intact tissue by cryo-ET. Cell 188 (8), pp. 2094 - 2110 (2025)

Del-Pozo-Rodriguez, J.; Tilly, P.; Lecat, R.; Vaca, H. R.; Mosser, L.; Brivio, E.; Balla, T.; Gomes, M. V.; Ramos-Morales, E.; Schwaller, N. et al.; Salinas-Giegé, T.; VanNoy, G.; England, E. M.; Kern Lovgren, A.; O’Leary, M.; Chopra, M.; Ojeda, N. M.; Toosi, M. B.; Eslahi, A.; Alerasool, M.; Mojarrad, M.; Pais, L. S.; Yeh, R. C.; Gable, D. L.; Hashem, M. O.; Abdulwahab, F.; Rakiz Alqurashi, M.; Sbeih, L. Z.; Adas Blanco, O. A.; Khater, R. A.; Oprea, G.; Rad, A.; Alzaidan, H.; Aldhalaan, H.; Tous, E.; Alsagheir, A.; Alowain, M.; Tamim, A.; Alfayez, K.; Alhashem, A.; Alnuzha, A.; Kamel, M.; Al-Awam, B. S.; Elnaggar, W.; Almenabawy, N.; O'Donnell-Luria, A.; Neil, J. E.; Gleeson, J. G.; Walsh, C. A.; Alkuraya, F. S.; AlAbdi, L.; Elkhateeb, N.; Selim, L.; Srivastava, S.; Nedialkova, D. D.; Drouard, L.; Romier, C.; Bayam, E.; Godin, J. D.: ADAT3variants disrupt the activity of the ADAT tRNA deaminase complex and impair neuronal migration. Brain (2025)

Kabatnik, S.; Zheng, X.; Pappas, G.; Steigerwald, S.; Padula, M. P.; Mann, M.: Deep visual proteomics reveals DNA replication stress as a hallmark of signet ring cell carcinoma. npi Precision Oncology 9 (1), 37 (2025)

Guinart, A.; Doellerer, D.; Qutbuddin, Y.; Zivkovic, H.; Branca, C.; Hrebik, D.; Schwille, P.; Feringa, B. L.: Photoswitchable Molecular Motor Phospholipid: Synthesis, Characterization, and Integration into Lipid Vesicles. Langmuir (2025)

Skowronek, P.; Wallmann, G.; Wahle, M.; Willems, S.; Mann, M.: An accessible workflow for high-sensitivity proteomics using parallel accumulation–serial fragmentation (PASEF). Nature Protocols (2025)

Li, X.; Wang, J.; Baptist, A. V.; Wu, W.; Heuer-Jungemann, A.; Zhang, T.: Crystalline Assemblies of DNA Nanostructures and their Functional Properties. Angewandte Chemie International Edition 64 (3), e202416948 (2025)

Pegoraro, C.; Karpova, E.; Qutbuddin, Y.; Sanchis, E. M.; Dimitrijevs, P.; Huck-Iriart, C.; Gavrilovic, S.; Arsenyan, P.; Schwille, P.; Felip-Leon, C. et al.; Duro-Castano, A.; Conejos-Sanchez, I.; Vicent, M. J.: Polyproline-Polyornithine Diblock Copolymers with Inherent Mitochondria Tropism. Advanced Materials, 2411595 (2025)

Honsa, M.; Pachmayr, I.; Heinze, L.; Bas, L.; Masullo, L. A.; Kwon, J.; Perovic, A.; Schulman, B. A.; Jungmann, R.: Imaging Ligand-Receptor Interactions at Single-Protein Resolution with DNA-PAINT. Small Methods, 2401799 (2025)

Rosenberger, F. A.; Mädler, S. C.; Thorhauge, K. H.; Steigerwald, S.; Fromme, M.; Lebedev, M.; Weiss, C. A. M.; Oeller, M.; Wahle, M.; Metousis, A. et al.; Zwiebel, M.; Schmacke, N. A.; Detlefsen, S.; Boor, P.; Fabian, O.; Frankova, S.; Krag, A.; Strnad, P.; Mann, M.: Deep Visual Proteomics maps proteotoxicity in a genetic liver disease. Nature (2025)

Speidel, J. D.; Yu, K.; Böttcher, R. T.: Phosphorylation of SNX17 impedes activation of Retriever-mediated sorting. Journal of Biological Chemistry, 110222 (2025)

Stubhan, S.; Baptist, A. V.; Korosy, C.; Narducci, A.; Moya Munoz, G. G.; Wendler, N.; Lak, A.; Sztucki, M.; Cordes, T.; Lipfert, J.: Determination of absolute intramolecular distances in proteins using anomalous X-ray scattering interferometry. Nanoscale 17 (6), pp. 3322 - 3330 (2025)

Weck, J. M.; Nair, R.; Kesici, M.-Z.; Shang, X.; Gavrilovic, S.; Monzel, C.; Heuer-Jungemann, A.: Effects of DNA Origami-Based Nanoagent Design on Apoptosis Induction in a Large 3D Cancer Spheroid Model. Small, 2502490 (2025)

Albrecht, V.; Müller-Reif, J. B.; Nordmann, T. M.; Mund, A.; Schweizer, L.; Geyer, P. E.; Niu, L.; Wang, J.; Post, F.; Oeller, M. et al.; Metousis, A.; Nielsen, A. B.; Steger, M.; Albrechtsen, N. J. W.; Mann, M.: Bridging the Gap From Proteomics Technology to Clinical Application: Highlights From the 68th Benzon Foundation Symposium. Molecular & Cellular Proteomics 23 (12), 100877 (2024)

Zinzula, L.; Beck, F.; Camasta, M.; Bohn, S.; Liu, C.; Morado, D.; Bracher, A.; Plitzko, J. M.; Baumeister, W.: Cryo-EM structure of single-layered nucleoprotein-RNA complex from Marburg virus. Nature Communications 15 (1), 10307 (2024)

Reimão-Pinto, M. M.; Behrens, A.; Forcelloni, S.; Fröhlich, K.; Kaya, S.; Nedialkova, D. D.: The dynamics and functional impact of tRNA repertoires during early embryogenesis in zebrafish. The EMBO Journal 43 (22), pp. 5747 - 5779 (2024)

Scott, D. C.; Chittori, S.; Purser, N.; King, M. T.; Maiwald, S. A.; Churion, K.; Nourse, A.; Lee, C.; Paulo, J. A.; Miller, D. J. et al.; Elledge, S. J.; Harper, J. W.; Kleiger, G.; Schulman, B. A.: Structural basis for C-degron selectivity across KLHDCX family E3 ubiquitin ligases. Nature Communications 15 (1), 9899 (2024)

Kögel, A.; Keidel, A.; Loukeri, M.-J.; Kuhn, C. C.; Langer, L. M.; Schäfer, I. B.; Conti, E.: Structural basis of mRNA decay by the human exosome–ribosome supercomplex. Nature 635 (8037), pp. 237 - 242 (2024)

Geyer, P. E.; Hornburg, D.; Pernemalm, M.; Hauck, S. M.; Palaniappan, K. K.; Albrecht, V.; Dagley, L. F.; Moritz, R. L.; Yu, X.; Edfors, F. et al.; Vandenbrouck, Y.; Mueller-Reif, J. B.; Sun, Z.; Brun, V.; Ahadi, S.; Omenn, G. S.; Deutsch, E. W.; Schwenk, J. M.: The Circulating Proteome-Technological Developments, Current Challenges, and Future Trends. Journal of Proteome Research 23 (12), pp. 5279 - 5295 (2024)

Nordmann, T. M.; Anderton, H.; Hasegawa, A.; Schweizer, L.; Zhang, P.; Stadler, P.-C.; Sinha, A.; Metousis, A.; Rosenberger, F. A.; Zwiebel, M. et al.; Satoh, T. K.; Anzengruber, F.; Strauss, M. T.; Tanzer, M. C.; Saito, Y.; Gong, T.; Thielert, M.; Kimura, H.; Silke, N.; Rodriguez, E.; Restivo, G.; Nguyen, H. H.; Gross, A.; Feldmeyer, L.; Joerg, L.; Levesque, M. P.; Murray, P. J.; Ingen-Housz-Oro, S.; Mund, A.; Abe, R.; Silke, J.; Ji, C.; French, L. E.; Mann, M.: Spatial proteomics identifies JAKi as treatment for a lethal skin disease. Nature 635 (8040), pp. 1001 - 1009 (2024)